Hi,
It seems the wiimote is losing the IR points because the sensitivity of the IR camera is too low.
Its tricky to fix this problem, but the wiimote camera can be programmed to increase its sensitivity from the default setting you may be encountering.
There are a number of things you can do to check this.
1. Is your wiimote genuine. Non-genuine wiimotes have poor tracking peformance.
2. Do the LEDS operate at 940nm, which seems to be optimum for IR sensitivity.
3. Do the LEDs have enough current. I like to put 1.5 Volts, or 100ma across each one for extra brightness.
4. You can check the LED performance independently using FreeTrack. There is a sensitivity slider and IR camera view feature that shows whether your wiimote is detecting these points properly, and whether the sensitivity can be improved.
5. If you are good at programming, the FreeTrack open source software has the sensitivity improvement code in it. You can also consult WiiBrew about it as well.
6. I have implemented a sensitivity improvement code in Glovepie for use with a whiteboard program.
See here (registered members only)
http://www.wiimoteproject.com/glovepie-projects/glovepie-wii-whiteboard/Good luck.